Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
THCA | rs73111428 | chr5:65598694 | G/T | 6.93E-10 | 483 | 15.9 | 16.2 | 13.05 | KM Plot |
THCA | rs73132149 | chr12:64617370 | C/G | 0.000233 | 487 | 15.93 | 15.3 | 17.73 | KM Plot |
THCA | rs73135799 | chr7:67068716 | G/T | 1.02E-11 | 487 | 15.97 | 14.1 | 17.77 | KM Plot |
THCA | rs73137803 | chr7:67071581 | G/A | 9.08E-12 | 490 | 15.97 | 14.52 | 17.77 | KM Plot |
THCA | rs73137805 | chr7:67073474 | C/T | 9.08E-12 | 490 | 15.97 | 14.52 | 17.77 | KM Plot |
THCA | rs73137811 | chr7:67075640 | G/A | 1.13E-11 | 487 | 15.9 | 14.93 | 17.77 | KM Plot |
THCA | rs73137821 | chr7:67081205 | T/G | 1.13E-11 | 487 | 15.9 | 14.93 | 17.77 | KM Plot |
THCA | rs73138095 | chr7:75884867 | T/C | 0.000109 | 486 | 16.37 | 16.57 | 11.77 | KM Plot |
THCA | rs73156959 | chr7:133639832 | T/C | 0.000271 | 482 | 16.2 | 14.1 | 29.15 | KM Plot |
THCA | rs73157336 | chr20:61474197 | C/G | 5.39E-5 | 487 | 15.07 | 17.02 | 15 | KM Plot |
THCA | rs73157353 | chr20:61484142 | A/G | 4.4E-5 | 483 | 15.07 | 17.47 | 14.55 | KM Plot |
THCA | rs73159959 | chr4:57184934 | C/T | 8.26E-7 | 485 | 15.9 | 16.65 | 12.67 | KM Plot |
THCA | rs73160480 | chr22:24247303 | C/G | 7.04E-6 | 468 | 16.07 | 15.67 | 14.47 | KM Plot |
THCA | rs7316260 | chr12:109498670 | C/T | 2.1E-7 | 475 | 15.97 | 16.87 | 6.17 | KM Plot |
THCA | rs73192264 | chr8:8772391 | T/C | 3.36E-6 | 487 | 15.23 | 18.6 | 12.07 | KM Plot |